ASP.Score {ASPBay} | R Documentation |
Calculate score statistics and the associated P-value for each SNPs
ASP.Score(Tem_Gen, Index_Gen, IBD)
Tem_Gen |
Genotypes of controls (denoted by the number of alternative allele) |
Index_Gen |
Genotypes of Index cases |
IBD |
IBD states for each affected sib pair |
Give the values of statistic and p-value of the association score test.
List of 2 vectors of length the number of SNPs:
Value |
Statistic values for each SNPs |
Pvalue |
P-values of the score test for each SNPs |
Claire Dandine-Roulland
Perdry, Herve, Muller-Myhsok, Bertram, et Clerget-Darpoux, Francoise. Using affected sib-pairs to uncover rare disease variants. Hum Hered, 2013.
data(ASPData) ASP.Score(ASPData$Control, ASPData$Index, ASPData$IBD )