readListInputFile {seqCBS} | R Documentation |
Reads a meta file that contains the file names and type of the data files. See details for the format.
readListInputFile(inputFilename, sep = "\t")
inputFilename |
The name of file, containing relevant information of all input files |
sep |
Delimiter of the meta input file, default is tab-delimited |
The meta input file should be organized in a table format with 2 columns, one of which is 'file' and the other is 'type', indicating the data file names and whether the data is from 'normal' or 'tumor'.
normalFiles |
A character vector containing the names of files with the normal reads |
tumorFiles |
A character vector containing the names of files with the tumor reads |
Jeremy J. Shen
# This shows the format of the meta file data(JSSim_Meta) print(JSSim_Meta)